Florida mosquitoes likely spreading Zika

Mosquitoes in Miami now appear to be transmitting Zika virus.

Four cases of Zika infection in Florida were probably acquired via the bite of local mosquitoes, the state’s health department announced July 29. These are the first cases of local transmission of the virus in the continental United States.

“Zika is now here,” Tom Frieden, director of U.S. Centers for Disease Control and Prevention, said in a news briefing July 29.

No mosquitoes trapped yet have tested positive for the virus, but officials suspect Aedes aegypti mosquitoes in a several-block area in north Miami are to blame. “Everything we’ve seen so far indicates that this is mosquito-borne transmission,” Frieden said.

Florida’s small cluster of cases does not necessarily foreshadow an epidemic, he said. The four infected people probably were bitten in early July. Since then, Florida has stepped up efforts to stamp out mosquitoes — including going door-to-door to get rid of standing water and spraying insecticides by truck and by people on foot.

“We believe that widespread transmission in the continental U.S. is unlikely,” Frieden said. “But it’s not impossible.”

Two other mosquito-borne diseases, dengue and chikungunya, have spread locally in Florida in the past. But, Frieden said, those diseases generally dead-end after infecting just one person.

Sea life stars in museum’s glass menagerie

From 1863 to 1890, Leopold and Rudolf Blaschka made more than 10,000 sea creatures out of glass. There were anemones with tapered tentacles and pearled undersides, translucent jellyfish trailing the most delicate threads and feather stars more than worthy of their name despite their rigid composition. The intricate invertebrates, crafted by the father-son team at their studio in Dresden, Germany, were shipped across the world to serve as teaching models at universities and museums. In an era before marine surveys and underwater photography, before the rise of scuba diving resorts, the Blaschkas showed the world the wonders of the sea.

Over five dozen of their glass wonders are now on display at the Corning Museum of Glass in “Fragile Legacy.” Though the exhibit opens with glass eyeballs and a piece of jewelry — a nod to the Blaschkas’ pre-invertebrate business — the highlight is a darkened room set up like an aquarium, with sea creatures seemingly floating in blue. There’s a notable absence of museum placards and descriptions. “We really want people to look at the glassiness,” says Marvin Bolt, a curator of the exhibit, before pointing out the “Field Guide to Underwater Models.” The pamphlet contains each animal’s species name, as it was known in 1885 (when Cornell University acquired the pieces, now on loan to Corning) and as it is known today.
The aquarium offers a sense of the Blaschkas’ style, but it’s the room next door that provides the substance. Sketches and watercolors, bottles of colored powders, tweezers, pliers, scoops and wire, along with a demonstration video, give a fuller sense of how the Blaschkas did their work. Equally impressive are the matchboxes filled with kleine augen (“little eyes” in German) and other tiny but uniform component pieces, suggestive of an assembly line approach to handcrafting the final glass forms. A series of case studies explains how conservators stabilized the pieces, and a trailer for a related documentary, also titled Fragile Legacy, highlights the vulnerability, not of the glass, but of the real-world creatures living in warming seas.
There’s one thing you won’t find in this exhibit — the flowers that the Blaschkas are most famous for today, commissioned by Harvard beginning in 1886. But you’ll spot seeds of this later work in the sea animals’ slender stalks and garlands of orbs. As the Blaschkas moved on to new subjects, their artistry evolved from the forms they’d already mastered.

T. rex look-alike unearthed in Patagonia

What had two puny arms, lived 90 million years ago and probably chowed down on other dinosaurs? (Hint: It’s not T. rex.)

A new dinosaur discovered in what is now Patagonia had the runty forelimbs of a Tyrannosaurus rex but is no cousin of the giant iconic predator, researchers report July 13 in PLOS ONE.

The new species, Gualicho shinyae, has a close relative in Africa, an analysis of fossils suggests. T. rex’s ancestors, on the other hand, came from Asia.
Gualicho is a “smaller, slimmer, trimmer version of a T. rex,” says study coauthor Peter Makovicky, a paleontologist at the Field Museum in Chicago. It probably weighed about a ton and was longer than a pickup truck.
In 2007, Makovicky’s team discovered Gualicho’s partial skeleton — including those impractical arms. The dinosaur probably caught prey with its huge head, Makovicky says. Though the researchers haven’t dug up a skull yet, tiny arms seem to be a trade-off for a big head. Finding Gualicho’s skull would help nail down that idea, he adds.

Gualicho may have fed on grazers called ornithopods, such as duck-billed dinosaurs. Or perhaps it fed on the long-necked, long-tailed sauropods, which were common in the region. But only the youngsters. Sauropod adults were gigantic, Makovicky says, definitely not prey for a (relatively) little guy like Gualicho.

‘Idea Makers’ tackles scientific thinkers’ big ideas and personal lives

It’s hard to pin down Stephen Wolfram’s scientific discipline. He is part mathematician, part computer scientist, part physicist. He’s also an inventor and entrepreneur, known for the mathematics software package Mathematica and a variety of other endeavors. And he blogs.

Among his blog posts and other essays and talks are commentaries on the lives of other prominent figures from science and math; some Wolfram knew personally, others he has researched extensively. In his new book Idea Makers, Wolfram has collected accounts of 16 such people, discussing their work and its meaning for the nature of science and the process of understanding math, computing and the physical world. Each entry provides a healthy dose of personal information as well.
Some of the people Wolfram discusses are widely known — Richard Feynman and Steve Jobs, for example. Others are relatively obscure, such as Russell Towle and Richard Crandall. But all have captivated Wolfram’s interest, either by way of friendship or their historical importance for the fields of study that Wolfram himself has contributed to.

On the historical side, Wolfram offers his views of the logician Kurt Gödel, computer scientist (perhaps the original computer scientist) Alan Turing and mathematicians John von Neumann and George Boole. Wolfram provides an especially extensive discussion of Ada Lovelace and her interactions with Charles Babbage as they contemplated the prospect of powerful computing engines a century ahead of their time.

Wolfram also dives into the story of Srinivasa Ramanujan, and the lessons his genius offers about the nature of math. With little formal training, Ramanujan discovered many surprising results that seemed at first glance to be a bunch of “random facts of mathematics.” But in recent decades, many have been linked to deep mathematical principles that he seems to have somehow perceived without knowing it. How did he do it? Wolfram suspects that he “had intuition and aesthetic criteria that in some sense captured some of the deeper principles we now know, even if he couldn’t express them directly.”

Personal style, whether as reflected in the subtle genius of Ramanujan or the boldness of vision-driven Jobs, plays an underappreciated role in the progress of science and technology. Wolfram has collected some illuminating examples of the ways the human side of scientific thinkers can enrich the work they do.

Zika kills brain cells in adult mice

Zika may harm grown-up brains.

The virus, which can cause brain damage in infants infected in the womb, kills stem cells and stunts their numbers in the brains of adult mice, researchers report August 18 in Cell Stem Cell. Though scientists have considered Zika primarily a threat to unborn babies, the new findings suggest that the virus may cause unknown — and potentially long-term — damage to adults as well.

In adults, Zika has been linked to Guillain-Barré syndrome, a rare neurological disorder (SN: 4/2/16, p. 29). But for most people, infection is typically mild: a headache, fever and rash lasting up to a week, or no symptoms at all. In pregnant women, though, the virus can lodge in the brain of a fetus and kill off newly developing cells (SN: 4/13/16).
If Zika targets newborn brain cells, adults may be at risk, too, reasoned neuroscientist Joseph Gleeson of Rockefeller University in New York City and colleagues. Parts of the forebrain and the hippocampus, which plays a crucial role in learning and memory, continue to generate nerve cells in adult brains.

In mice infected with Zika, the virus hit these brain regions hard. Nerve cells died and the regions generated one-fifth to one-half as many new cells compared with those of uninfected mice. The results might not translate to humans; the mice were genetically engineered to have weak immune systems, making them susceptible to Zika.

But Zika could potentially harm immunocompromised people and perhaps even healthy people in a similar way, the authors write.

Weapon of bone destruction identified

A blood cancer uses a secret weapon for tearing bone apart. That same mechanism may allow breast cancer and other types of tumors to spread to bones, a new study suggests.

In patients with the blood cancer multiple myeloma, an enzyme called thymidine phosphorylase sets off a chain reaction that leads to bone destruction, researchers report August 24 in Science Translational Medicine. Drugs that inhibit the enzyme caused mice to lose less bone.

The findings may lead to new therapies for stopping bone loss from multiple myeloma or other cancers that spread to bone. Halting bone destruction may even make bones less hospitable for tumors, stopping their growth, too, says Jing Yang, a cancer researcher at the University of Texas MD Anderson Cancer Center in Houston.
Multiple myeloma is a cancer that grows in bone marrow. Myeloma cells talk directly to bone-remodeling cells. The tumor cells’ messages send bone-building cells on permanent vacation while stimulating bone-demolishing cells. The result is weak bones, holes, fractures and bone pain.

Yang and colleagues had previously discovered that a biological process in myeloma cells that weakens bones also boosts production of thymidine phosphorylase. The enzyme was known to be more abundant in many types of cancers where it stimulates blood vessel growth to tumors and stops tumor cells from dying. No one knew it was involved in poking holes in bones.

Thymidine phosphorylase in myeloma cells kicks off a series of steps that convert a building block of DNA called thymidine into a small molecule called 2-deoxy-D-ribose, or 2DDR. Myeloma cells secrete 2DDR and bone cells pick it up, sending a signal to turn off genes that control bone cell activity. When bone-building cells called osteoblasts get the message, they stop working, Yang and colleagues discovered. But bone-eating cells called osteoclasts work harder. That tips the cycle of bone remodeling toward destruction.

Yang’s team injected myeloma cells into the femurs of mice. After the cancer was established, the researchers treated some of the mice with drugs that inhibit thymidine phosphorylase. Those mice lost less bone than untreated mice with myeloma did.

The drugs have already been approved for treating other types of cancer. If the results of the mouse study hold up in human clinical tests, the drugs may also preserve bone in myeloma patients and people with other cancers that have spread to their bones, Yang says. She hopes that the drugs may even help repair bone damage.
“We’re getting better at getting rid of myeloma cells,” says Rebecca Silbermann, a hematologist at Indiana University School of Medicine in Indianapolis. “But we have no way to heal those bone lesions at this point, even if a person’s myeloma is gone.”

Currently, drugs used to maintain bone strength slow bone-dissolving cells, but don’t put bone-building cells back to work, Silbermann says. Drugs like the thymidine phosphorylation inhibitors used in the study might have better results because they may prod bone-building cells to do their jobs again.

Because thymidine phosphorylase’s message passes through multiple receivers and transmitters, researchers also have multiple options for interrupting the relay, says Yibin Kang. That interference may one day allow doctors to stop or even reverse bone loss from cancer and maybe even from osteoporosis, says Kang, a cancer researcher at Princeton University who studies how breast cancer spreads to bone.

While the study provides important new clues about how myeloma breaks down bone, it’s not clear whether thymidine phosphorylase starts the process early in cancer or just helps perpetuate it later, says Qing Yi, a myeloma researcher at the Cleveland Clinic. It’s also too early to tell whether breast cancer and others use the same process for breaking down bone, he says. “This has a long way to go before it can ever reach the patient.”

Greenland may be home to Earth’s oldest fossils

A melting snow patch in Greenland has revealed what could be the oldest fossilized evidence of life on Earth. The 3.7-billion-year-old structures may help scientists retrace the rise of the first organisms relatively soon after Earth’s formation around 4.5 billion years ago (SN: 2/8/14, p. 16), the discoverers report online August 31 in Nature.

Unlike dinosaur bones, the new fossils are not preserved bits of an ancient critter. The Greenland fossils are mounds of minerals a few centimeters tall that may have been deposited by clusters of microbes several hundred million years after Earth formed. The shape and chemical composition of the mounds, called stromatolites, match those formed by modern bacterial communities living in shallow seawater, says a team led by geologist Allen Nutman of the University of Wollongong in Australia.

If confirmed, the fossils demonstrate that sophisticated, mound-building microbial life appeared early on in Earth’s history. That early start backs up previous genetic and chemical studies that place the advent of basic life on Earth before 4 billion years ago (SN Online: 10/19/15).

Kauai’s native forest birds are headed toward extinction

Hawaiian honeycreepers are a marvel of evolution. Millions of years ago, some finches arrived on the Hawaiian Islands and began to diversify. As the Pacific Plate moved over the Hawaiian hotspot and new islands formed and others shriveled away, these colorful songbirds evolved into more than 50 species that differed so much in what they ate, where they lived and how they looked that it took scientists quite a while to figure out that they were all related.

More than half of those species are now gone. “Many extinctions took place when the islands were first settled by Polynesian people,” notes Helen James, who, as curator of birds at Smithsonian’s National Museum of Natural History, has studied the birds’ evolutionary history. Then Westerners arrived and bird populations started to disappear more quickly due to a combination of threats, including habitat loss, introduction of invasive species and the arrival of diseases such as avian malaria.

Bird populations on Hawaii’s oldest island, Kauai, have been hit especially hard. Kauai lost at least eight species of honeycreepers — as well as several other “marvelous species” of birds, James notes — before people began keeping good records of the island’s fauna. And now a new study warns that the birds’ situation will get worse — and soon. The honeycreepers that are left on the island are declining fast, and some species could disappear in as little as a decade.

Eben Paxton of the U.S. Geological Survey Pacific Islands Ecosystems Research Center at Hawaii Volcanoes National Park and colleagues looked at population trends for seven species of native forest birds living on Kauai’s Alakai Plateau, the eroded crater of a long-extinct volcano. On other Hawaiian islands, only high-elevation areas have generally been cool enough to keep out the mosquitoes that spread avian diseases. But on lower-lying Kauai, its forests have tended to be cooler than similar-elevation regions on the other islands, so spots such as the Alakai Plateau have been disease-free refuges for native birds.
Or, they were. A 2014 study found that disease prevalence in birds had more than doubled there between 1994-1997 and 2007-2013. Climate change had warmed the plateau enough that disease-laden mosquitoes could spread.
In the new study, Paxton and his colleagues found that six of seven native forest birds surveyed (an eighth proved too wily for scientists to accurately count) are rapidly disappearing and their ranges contracting. All six are honeycreepers, and four are now found only in small, remote parts of the plateau. Fewer than 1,000 Akekee and fewer than 500 Akikiki remain, the team reports September 2 in Science Advances.

“If native species linearly decline at a rate similar to or greater than that of the past decade, then multiple extinctions are likely in the next decade,” the team writes.

James says that she hopes the new findings will be a call to action. “Their data show alarming declines in population and geographic ranges of endemic Hawaiian honeycreepers on the island of Kauai,” she says. The birds’ extinction “would be a tremendous loss.”

Even without avian diseases and climate change, the honeycreepers still face threats from habitat loss, introduced predators and competition with non-native birds (some of whom, such as the Japanese bush-warbler, are thriving on the plateau, the study finds). Reducing those threats could buy the honeycreepers some time to adapt to the growing threat of disease. Scientists can also help by developing genetically modified mosquitoes and figuring out why honeycreepers are so susceptible to avian malaria — and how to protect them from it, James notes.

“The Hawaiian honeycreepers are a classic example of adaptive radiation in animals, second only to Darwin’s finches,” she says. Losing Kauai’s endemic honeycreepers “would definitely cost us in terms of our opportunities to study, understand and appreciate nature.”

Aneil Agrawal unites math and mess

Aneil Agrawal, his rangy frame at ease on a black metal street bench, is staring into some midair memory and speaking about disgust.

“I was first exposed to the idea of theoretical biology as an undergraduate and I actually hated it,” he says. “I loved biology and I liked math — it was like two different food types that you like but the two of them together are going to be terrible.”

Since then, he has remained a fan of the two foods, and his distaste for combining them has turned into enthusiasm strong enough to build a career on. Agrawal, now a 41-year-old evolutionary geneticist at the University of Toronto, both builds mathematical descriptions of biological processes and leads what he describes as “insanely laborious” experiments with fruit flies, duckweed and microscopic aquatic animals called rotifers.
Often experimentalists venturing into theory “dabble and do some stuff, but it’s not very good,” says evolutionary biologist Mark Kirkpatrick of the University of Texas at Austin. Agrawal, however, is “one of the few people who’s doing really good theory and really good experimental work.”

Two of the themes Agrawal works on — the evolution of sex and the buildup over time of harmful mutations — are “very deep and important problems in evolutionary biology,” Kirkpatrick says. Agrawal and colleagues have made a case for a once-fringe idea: that an abundance of harmful mutations can invite even more harmful mutations. Agrawal’s work has also provided rare data to support the idea that the need to adapt to new circumstances has favored sexual over asexual reproduction. Why sexual reproduction is much more common among complex life-forms has been a long-standing puzzle in biology.
Life’s complexity appealed to Agrawal from childhood; he remembers days playing among the backyard bugs and frogs in suburban Vancouver. At first, he imagined his grown-up life out in the field, “living in a David Attenborough show.” As he grew older though, he discovered he was a lab animal: “I was more interested in being able to ask more precise questions under more controlled circumstances.”

Sally Otto, now president-elect of the Society for the Study of Evolution, met Agrawal in the 1990s when he was an undergraduate at the University of British Columbia in Vancouver. He returned to Vancouver in 2003, after earning his Ph.D., to do experimental work and “beef up his ability to do theory,” she says. She cosupervised his postdoctoral effort. Agrawal “picks up theory very quickly,” Otto says. Knowing a huge amount of math to begin with is less important than having insight into what math to learn. The first alluring ideas about how to approach a puzzle often don’t work out, she says, so “there’s a certain doggedness — you have to really keep at it.”

Agrawal needed some time before he came around to theoretical biology. It disgusted him, he says, because he expected it to take the rich variety out of biology. “The reason many people, including me, were attracted to biology was because it’s not boxes and triangles,” he says. “It’s complicated and interesting.” At first he thought modeling a biological process mathematically “sterilized it.” But he eventually found that mathematical description could “help to clarify our thinking about the wonderful mess of diversity that’s out there.”
At the street bench, Agrawal muses about how he tends to “think quantitatively.” His father has a Ph.D. in engineering, but “we weren’t the kind of family that had to do math problems at the dinner table.” He laughs. “Though I do that to my own kids.” His success so far is mixed, depending in part on whether he catches his two sons, ages 10 and 7, in the right mood.
Agrawal also thinks intensely, possibly another secret to his success — he has received more than half a dozen awards and prizes, including the 2015 Steacie Prize for Natural Sciences. The bench where we’ve settled is only half a block from the conference center in Austin, where Evolution 2016, the field’s biggest meeting of the year, has hit day four of its five-day marathon. Agrawal gave one of the first talks, a smooth, perfectly timed zoom through a recent fly experiment. He is a coauthor on five more presentations, along with chairing one of the frenetic sessions where talks are compressed into five minutes. By this point, many of the 1,800 or so attendees are showing strain — wearing name tags wrong side frontward, snoring open-mouthed in hallway chairs or flailing their arms in conversations fueled by way too much caffeine. Agrawal, however, seems relaxed, listening quietly, staring off in thought, speaking in quiet bursts. This guy can focus.

One of his early theory papers studied mutation accumulation. Previous work had suggested that microbes in stressful environments, compared with microbes lapped in luxury, are more likely to make mistakes in copying genes that then get passed on to the next generation. Agrawal wondered whether cells that are stressed for another reason — an already heavy burden of harmful mutations — would likewise be more inclined to build up additional mutations. He calls this scenario “a spiral of doom.”

The idea intrigued him because he suspected that sexual reproduction would do a better job of purging these mutations than asexual reproduction. “What I found in doing the theory was that I was exactly wrong,” he says. The sexual populations would end up with more, not fewer, mutations.

Though the theory part of the paper turned out well, the journal Genetics rejected it — there was hardly any experimental evidence that the scenario would arise in the real world.

Agrawal published the paper elsewhere in 2002 and, when he began setting up his own lab at the University of Toronto, he returned to the idea. In the years since, he and colleagues have published a string of papers adding evidence to the argument. They have found, for example, that fruit flies burdened with misbegotten genes lag in growth and struggle to keep their DNA in good repair. The idea is no longer airy speculation, says Charles Baer, who’s checking for mutation accumulation in nematodes at the University of Florida in Gainesville.

Chrissy Spencer, a postdoc during the early years of Agrawal’s mutation studies, points out that a vital skill of a good experimentalist is just knowing intuitively whether a species is right for a certain kind of test. Agrawal has that knack, for better and for worse. For some studies on the evolution of sex, Agrawal eventually turned to rotifers. The stubby little cylinders with a circlet of hairy projections around their mouths can reproduce either sexually or asexually, so they’re great for testing what factors favor one over the other. Rotifers, however, are also “finicky,” he says. His students have cared for them, sometimes for months, only to have them all die for no discernible reason, sometimes before generating any data.

Having the practitioner’s inside view of experiments and theory may help Agrawal, but it also has its costs. “There are better theoreticians out there and there are better experimentalists,” he says, and he wishes at times that he was more solidly in one camp or the other. He pauses and then, a biologist to the core, says: “That’s my niche.”

Ancient microbe fossils show earliest evidence of shell making

DENVER — Life on Earth got into the shell game more than 200 million years earlier than previously thought.

Fossilized eukaryotes — complex life-forms that include animals and plants — discovered in Canada are decked out in armorlike layers of mineral plates, paleobiologist Phoebe Cohen said September 27 at the Geological Society of America’s annual meeting. At about 809 million years old, the find is the oldest evidence of organisms controlling the formation of minerals, a process called biomineralization.
This new origin of biomineralization coincides with major changes that mark the end of a period known as the “boring billion” (SN: 11/14/15, p. 18), said Stanford University paleontologist Erik Sperling, who was not involved in the discovery. “There were big things going on with ocean chemistry,” he said. “It’s interesting to see the biological response.”

These ancient eukaryotes built their exoskeletons using a very different process from most modern shell-making microbes. That uniqueness offers insights into how the mineral-making ability first evolved, said Cohen, who studies ancient ecosystems at Williams College in Williamstown, Mass.

“We have been able to identify specific conditions that facilitated the evolution of the first eukaryote to biomineralize in Earth’s history,” she said. “It paints a beautiful picture of the ecology and evolution and environmental conditions that led to this dramatic innovation.”

Donning an exoskeleton of minerals protects microbes from predators and forms a crucial stage in the modern carbon cycle. The shells make marine microbes such as certain phytoplankton species sink faster after they die, removing carbon from the upper ocean. Previous clear evidence of eukaryote biomineralization dates back to around 560 million years ago in early corallike animals.

Odd fossils discovered in the late 1970s and covered in mineral plates shaped like circles, squares and “Honeycomb cereal” (as Cohen described them) hinted that the skill evolved much earlier, but the discovery raised many questions. Dating techniques then put the age of the fossils somewhere within a 100-million-year range from about 811 million to 717 million years ago, and scientists couldn’t rule out that the fossils’ scalelike minerals formed after the organisms died.
Cohen and colleagues revisited these curious fossils. By accurately dating the organic-rich shale a few meters below the fossils in the rock record, the researchers pegged the fossils’ age at 809 million years old, give or take a few million years. An electron microscope let researchers see that each plate is a weave of elongated mineral fibers. This intricate, orderly design had to have been purposefully built by life manipulating mineral formation, Cohen said.

The mineral plates themselves are odd. Most modern microbes make shells out of calcium carbonate, but the ancient shells are made of calcium phosphate, the same crystal used in human teeth enamel. Today, phosphate is limited in the environment and most microbes avoid wasting it.

That may not have been as much of an issue in the marine basin where the eukaryotes lived, the researchers found. Analysis of rocks surrounding the fossils indicate that the amount of oxygen in the waters where the eukaryotes lived was inconsistent. Fluctuating oxygen levels pulled phosphate from underlying sediment into the water, where it was available for mineral making. These favorable conditions plus the need for protection from predation (SN: 11/28/15, p. 13) probably drove the first evolution of biomineralization, Cohen said. Eventually the environment changed, and these shell-making species died out.